Availability

Publication

The methods implemented in Ssylla are given in the following publication, which should be cited under noteworthy use of Ssylla

Spencer Krieger and John Kececioglu, “Predicting protein secondary structure by an ensemble through feature-based accuracy estimation.” Proceedings of the 11th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB), 29, 1-10, 2020.

Source code

Source code for accuracy estimators for state-of-the-art tools and the hybrid ensemble of Nnessy and Porter, along with documentation is available on GitHub.
Source code for our state-of-the-art tool for protein secondary structure prediction, Nnessy, is also available.